Capnocytophaga ochracea strain NCTC11546

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga ochracea strain NCTC11546 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and the presence of flagella, which are involved in its motility. This strain exists in both single and chain arrangements, indicative of its cellular organization. It is classified as a chemoorganotroph, meaning it derives energy from organic compounds, and thrives optimally at a temperature of 35°C, which places it within the mesophilic temperature range. This bacterium is free-living and is known to inhabit multiple environments, indicating its ecological versatility. C. ochracea is associated with humans (Homo sapiens) and other metazoans, suggesting a potential role in the microbiota of these hosts. However, it is also noted for its pathogenicity in humans, which raises concerns regarding its implications for human health. The genetic information associated with this strain is cataloged under accession number UARG00000000.1, indicating its significance in microbial research. Notably, C. ochracea has a singular replicon and a double membrane structure, which is characteristic of Gram-negative bacteria. Overall, the presence of C. ochracea in human-associated environments highlights its potential impact on host health and the complex interactions it may have within microbial communities. Understanding its ecological role and pathogenic potential further emphasizes the importance of continued research into this bacterium.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga ochracea
Strainstrain NCTC11546

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Capnocytophaga ochracea strain NCTC11546
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature35
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Capnocytophaga ochracea strain NCTC11546 genome assembly, contig:

Gene Summary

Adenine Count

900493 bp

Thymine Count

889206 bp

Guanine Count

578470 bp

Cytosine Count

578622 bp

Genome Length

2946791 bp

Protein-coding Genes

2597 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative mannose-6-phosphate isomerase yvyiNCTC11546_00959Not AvailableNegative1051371 - 105233336219.2
acetoin dehydrogenase e2 subunit dihydrolipoyllysine-residue acetyltransferaseNCTC11546_00960Not AvailableNegative1052414 - 105323830117.9
putative nad(p)h nitroreductase mhqnNCTC11546_00961Not AvailableNegative1053290 - 105401227886.0
heat shock protein jNCTC11546_00962Not AvailableNegative1054461 - 105558241205.1
hsp-70 cofactorNCTC11546_00963Not AvailableNegative1055593 - 105615320879.6
macrolide-specific efflux protein maca precursorNCTC11546_00964Not AvailablePositive1057010 - 105829346856.5
uncharacterised proteinNCTC11546_00965Not AvailablePositive1058368 - 105879316177.7
protein of uncharacterised function (duf2795)NCTC11546_00966Not AvailablePositive1058901 - 10591228703.77
preprotein translocase subunit secaNCTC11546_00967Not AvailablePositive1059483 - 1062845127985.0
uncharacterised proteinNCTC11546_00968Not AvailablePositive1062870 - 106340019661.9

Displaying genes 981 – 990 of 2673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.