Capnocytophaga ochracea strain NCTC11546

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga ochracea strain NCTC11546 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and the presence of flagella, which are involved in its motility. This strain exists in both single and chain arrangements, indicative of its cellular organization. It is classified as a chemoorganotroph, meaning it derives energy from organic compounds, and thrives optimally at a temperature of 35°C, which places it within the mesophilic temperature range. This bacterium is free-living and is known to inhabit multiple environments, indicating its ecological versatility. C. ochracea is associated with humans (Homo sapiens) and other metazoans, suggesting a potential role in the microbiota of these hosts. However, it is also noted for its pathogenicity in humans, which raises concerns regarding its implications for human health. The genetic information associated with this strain is cataloged under accession number UARG00000000.1, indicating its significance in microbial research. Notably, C. ochracea has a singular replicon and a double membrane structure, which is characteristic of Gram-negative bacteria. Overall, the presence of C. ochracea in human-associated environments highlights its potential impact on host health and the complex interactions it may have within microbial communities. Understanding its ecological role and pathogenic potential further emphasizes the importance of continued research into this bacterium.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga ochracea
Strainstrain NCTC11546

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Capnocytophaga ochracea strain NCTC11546
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature35
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Capnocytophaga ochracea strain NCTC11546 genome assembly, contig:

Gene Summary

Adenine Count

900493 bp

Thymine Count

889206 bp

Guanine Count

578470 bp

Cytosine Count

578622 bp

Genome Length

2946791 bp

Protein-coding Genes

2597 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine ammonia-lyaseNCTC11546_00949Not AvailablePositive1038748 - 104013652076.1
6-phosphogluconolactonaseNCTC11546_00950Not AvailablePositive1040195 - 104133742102.2
uncharacterised proteinNCTC11546_00951Not AvailablePositive1041379 - 104199023286.1
formate--tetrahydrofolate ligaseNCTC11546_00952Not AvailablePositive1042037 - 104370459212.8
outer membrane protein omp85 precursorNCTC11546_00953Not AvailableNegative1043746 - 104632299008.8
trna (guanosine(18)-2'-o)-methyltransferaseNCTC11546_00954Not AvailablePositive1046549 - 104728026874.8
dtdp-rha:alpha-d-glcnac-pyrophosphate polyprenol, alpha-3-l-rhamnosyltransferaseNCTC11546_00955Not AvailableNegative1047737 - 104871437429.9
predicted type iv restriction endonucleaseNCTC11546_00956Not AvailableNegative1048711 - 104916617893.8
dna polymerase iii subunit deltaNCTC11546_00957Not AvailablePositive1049203 - 105021938628.4
3-oxoacyl-[acyl-carrier-protein] synthase 3NCTC11546_00958Not AvailableNegative1050341 - 105135136969.2

Displaying genes 971 – 980 of 2673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.