Capnocytophaga ochracea strain NCTC11546

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga ochracea strain NCTC11546 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and the presence of flagella, which are involved in its motility. This strain exists in both single and chain arrangements, indicative of its cellular organization. It is classified as a chemoorganotroph, meaning it derives energy from organic compounds, and thrives optimally at a temperature of 35°C, which places it within the mesophilic temperature range. This bacterium is free-living and is known to inhabit multiple environments, indicating its ecological versatility. C. ochracea is associated with humans (Homo sapiens) and other metazoans, suggesting a potential role in the microbiota of these hosts. However, it is also noted for its pathogenicity in humans, which raises concerns regarding its implications for human health. The genetic information associated with this strain is cataloged under accession number UARG00000000.1, indicating its significance in microbial research. Notably, C. ochracea has a singular replicon and a double membrane structure, which is characteristic of Gram-negative bacteria. Overall, the presence of C. ochracea in human-associated environments highlights its potential impact on host health and the complex interactions it may have within microbial communities. Understanding its ecological role and pathogenic potential further emphasizes the importance of continued research into this bacterium.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga ochracea
Strainstrain NCTC11546

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Capnocytophaga ochracea strain NCTC11546
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature35
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Capnocytophaga ochracea strain NCTC11546 genome assembly, contig:

Gene Summary

Adenine Count

900493 bp

Thymine Count

889206 bp

Guanine Count

578470 bp

Cytosine Count

578622 bp

Genome Length

2946791 bp

Protein-coding Genes

2597 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-linked outer membrane protein, susc/raga familyNCTC11546_00772Not AvailablePositive817142 - 81796331150.8
50s ribosomal protein l34NCTC11546_00773Not AvailablePositive818068 - 8182266258.82
putative hydrolaseNCTC11546_00774Not AvailablePositive818310 - 81907128799.6
uncharacterised proteinNCTC11546_00775Not AvailablePositive819143 - 81963718424.2
inner membrane lipoprotein yiad precursorNCTC11546_00776Not AvailablePositive819661 - 82035324354.9
lysine-sensitive aspartokinase 3NCTC11546_00777Not AvailablePositive820631 - 82188147114.5
histidine--trna ligaseNCTC11546_00778Not AvailableNegative821991 - 82336751576.3
nucleotidyl transferase of uncharacterised function (duf1814)NCTC11546_00779Not AvailableNegative823376 - 82404426000.4
uncharacterised proteinNCTC11546_00780Not AvailableNegative823992 - 82429412054.3
nucleoside triphosphate pyrophosphohydrolaseNCTC11546_00781Not AvailableNegative824351 - 82513329844.5

Displaying genes 791 – 800 of 2673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.