Capnocytophaga ochracea strain NCTC11546

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga ochracea strain NCTC11546 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and the presence of flagella, which are involved in its motility. This strain exists in both single and chain arrangements, indicative of its cellular organization. It is classified as a chemoorganotroph, meaning it derives energy from organic compounds, and thrives optimally at a temperature of 35°C, which places it within the mesophilic temperature range. This bacterium is free-living and is known to inhabit multiple environments, indicating its ecological versatility. C. ochracea is associated with humans (Homo sapiens) and other metazoans, suggesting a potential role in the microbiota of these hosts. However, it is also noted for its pathogenicity in humans, which raises concerns regarding its implications for human health. The genetic information associated with this strain is cataloged under accession number UARG00000000.1, indicating its significance in microbial research. Notably, C. ochracea has a singular replicon and a double membrane structure, which is characteristic of Gram-negative bacteria. Overall, the presence of C. ochracea in human-associated environments highlights its potential impact on host health and the complex interactions it may have within microbial communities. Understanding its ecological role and pathogenic potential further emphasizes the importance of continued research into this bacterium.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga ochracea
Strainstrain NCTC11546

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Capnocytophaga ochracea strain NCTC11546
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature35
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Capnocytophaga ochracea strain NCTC11546 genome assembly, contig:

Gene Summary

Adenine Count

900493 bp

Thymine Count

889206 bp

Guanine Count

578470 bp

Cytosine Count

578622 bp

Genome Length

2946791 bp

Protein-coding Genes

2597 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterised proteinNCTC11546_00239Not AvailablePositive209791 - 21055229810.7
uracil-dna glycosylaseNCTC11546_00240Not AvailablePositive210556 - 21122124640.2
yihy family inner membrane proteinNCTC11546_00241Not AvailablePositive211439 - 21235035021.6
primosomal protein n'NCTC11546_00242Not AvailablePositive212350 - 21480394144.0
protein of uncharacterised function (duf2853)NCTC11546_00243Not AvailableNegative214906 - 21525312947.6
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthaseNCTC11546_00244Not AvailableNegative215293 - 21696663349.6
polyphosphate kinaseNCTC11546_00245Not AvailableNegative216967 - 21907281667.9
abc-2 family transporter proteinNCTC11546_00246Not AvailableNegative219074 - 22034847746.2
daunorubicin/doxorubicin resistance atp-binding protein drraNCTC11546_00247Not AvailableNegative220542 - 22147135335.9
prolipoprotein diacylglyceryl transferaseNCTC11546_00248Not AvailablePositive222099 - 22305836596.8

Displaying genes 261 – 270 of 2673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.