Escherichia coli strain Broiler parent109

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent109 is a Gram-negative, rod-shaped bacterium characterized by its facultative anaerobic metabolism and mobility, facilitated by the presence of flagella. It typically exists in pairs or singles and thrives optimally at 37°C, indicating its mesophilic nature. This strain is host-associated and displays a free-living biotic relationship, interacting with a wide range of hosts, including Homo sapiens, Gallus gallus, and various other vertebrates and invertebrates. E. coli Broiler parent109 is implicated in numerous health effects, particularly in humans, where it can cause urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain is associated with both foodborne infections and clinical diseases, including diarrhea, peritonitis, and even complications in renal function. Its pathogenicity highlights the potential for significant impacts on public health, especially in relation to food safety and zoonotic transmissions. The extensive range of hosts and health effects associated with E. coli Broiler parent109 underscores its ecological versatility and adaptability. This strain's ability to thrive in diverse environments and its potential to cause various diseases illustrate the complex interactions between microbial pathogens and their hosts. Understanding these traits is crucial for developing effective management strategies in both clinical and agricultural settings, as well as for addressing public health challenges related to foodborne illnesses.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent109

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent109
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent109

Gene Summary

Adenine Count

1254319 bp

Thymine Count

1243861 bp

Guanine Count

1245555 bp

Cytosine Count

1290443 bp

Genome Length

5034178 bp

Protein-coding Genes

4544 genes

Non-Coding Genes

359 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Host specificity proteinEYY28_04110Not AvailableNegative808166 - 81046984823.7
Tail componentEYY28_04115Not AvailableNegative810530 - 81116221906.6
Tail fiber componentEYY28_04120Not AvailableNegative811099 - 81184228158.2
Tail componentEYY28_04125Not AvailableNegative811847 - 81254525671.9
Tail componentEYY28_04130Not AvailableNegative812545 - 81287412486.0
AttlNot AvailableNot AvailablePositive812595 - 812608Not Available
Tail componentEYY28_04135Not AvailableNegative812871 - 81543292174.5
Tail componentEYY28_04140Not AvailableNegative815425 - 81585916136.0
Tail componentEYY28_04145Not AvailableNegative815841 - 81626315386.0
Major tail protein vEYY28_04150Not AvailableNegative816279 - 81701925806.1

Displaying genes 1 – 10 of 4903 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Catheter-associated urinary tract infectionCausesPMC2900259
CautiCausesPMC2900259
Hemorrhagic colitisCausesPMC9731836
Hemolytic and uremic syndrome (hus)CausesPMC9731836
Infection in the urinary tractCausesPMC10160630
Infection in other extraintestinal sitesCausesPMC10160630
Haemolytic uraemic syndromeCausesPMC11542628
HusCausesPMC11542628
SepsisCausesPMC12660362
BacteraemiaCausesPMC12660362

Displaying health effects 71 – 80 of 103 in total