Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent109 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1254319 bp
Thymine Count
1243861 bp
Guanine Count
1245555 bp
Cytosine Count
1290443 bp
Genome Length
5034178 bp
Protein-coding Genes
4544 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3304 domain-containing protein | EYY28_02685 | Not Available | Negative | 526783 - 527325 | 20037.3 |
| duf3304 domain-containing protein | EYY28_02690 | Not Available | Negative | 527310 - 527834 | 19382.2 |
| duf3304 domain-containing protein | EYY28_02695 | Not Available | Negative | 527849 - 528169 | 12233.8 |
| duf3304 domain-containing protein | EYY28_02700 | Not Available | Negative | 528139 - 528312 | 6026.17 |
| duf4123 domain-containing protein | EYY28_02705 | Not Available | Negative | 528840 - 529604 | 29058.4 |
| type vi secretion system tip protein vgrg | EYY28_02710 | Not Available | Negative | 529617 - 531848 | 82720.7 |
| hcp family type vi secretion system effector | EYY28_02715 | Not Available | Negative | 532069 - 532587 | 19191.7 |
| type vi secretion system contractile sheath small subunit | EYY28_02720 | Not Available | Positive | 533289 - 533792 | 18438.2 |
| type vi secretion system contractile sheath large subunit | EYY28_02725 | Not Available | Positive | 533815 - 535299 | 55688.9 |
| type vi secretion system baseplate subunit tsse | EYY28_02730 | Not Available | Positive | 535304 - 535729 | 16080.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




