Escherichia coli strain Broiler parent109

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent109 is a Gram-negative, rod-shaped bacterium characterized by its facultative anaerobic metabolism and mobility, facilitated by the presence of flagella. It typically exists in pairs or singles and thrives optimally at 37°C, indicating its mesophilic nature. This strain is host-associated and displays a free-living biotic relationship, interacting with a wide range of hosts, including Homo sapiens, Gallus gallus, and various other vertebrates and invertebrates. E. coli Broiler parent109 is implicated in numerous health effects, particularly in humans, where it can cause urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain is associated with both foodborne infections and clinical diseases, including diarrhea, peritonitis, and even complications in renal function. Its pathogenicity highlights the potential for significant impacts on public health, especially in relation to food safety and zoonotic transmissions. The extensive range of hosts and health effects associated with E. coli Broiler parent109 underscores its ecological versatility and adaptability. This strain's ability to thrive in diverse environments and its potential to cause various diseases illustrate the complex interactions between microbial pathogens and their hosts. Understanding these traits is crucial for developing effective management strategies in both clinical and agricultural settings, as well as for addressing public health challenges related to foodborne illnesses.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent109

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent109
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent109

Gene Summary

Adenine Count

1254319 bp

Thymine Count

1243861 bp

Guanine Count

1245555 bp

Cytosine Count

1290443 bp

Genome Length

5034178 bp

Protein-coding Genes

4544 genes

Non-Coding Genes

359 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type-f conjugative transfer system protein trbiEYY28_00390Not AvailableNegative67245 - 6763114146.9
type iv secretion system protein tracEYY28_00395Not AvailableNegative67628 - 7025599165.3
conjugal transfer protein trarEYY28_00400Not AvailableNegative70415 - 706368313.95
type iv conjugative transfer system lipoprotein travEYY28_00405Not AvailableNegative70771 - 7128618463.2
conjugal transfer protein trbgEYY28_00410Not AvailableNegative71283 - 715349126.86
duf2689 domain-containing proteinEYY28_00415Not AvailableNegative71527 - 7188012657.4
conjugal transfer protein trapEYY28_00420Not AvailableNegative71834 - 7242422020.7
conjugal transfer protein trabEYY28_00425Not AvailableNegative72414 - 7384150478.9
type-f conjugative transfer system secretin trakEYY28_00430Not AvailableNegative73841 - 7451223482.0
type iv conjugative transfer system protein traeEYY28_00435Not AvailableNegative74556 - 7512221197.5

Displaying genes 401 – 410 of 4903 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total