Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent109 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1254319 bp
Thymine Count
1243861 bp
Guanine Count
1245555 bp
Cytosine Count
1290443 bp
Genome Length
5034178 bp
Protein-coding Genes
4544 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY28_14125 | Not Available | Negative | 2758072 - 2758293 | 7682.33 |
| recombinase family protein | EYY28_14130 | Not Available | Positive | 2758294 - 2758548 | 9224.24 |
| hypothetical protein | EYY28_14135 | Not Available | Negative | 2759009 - 2759308 | 11400.8 |
| Trna-gly | Not Available | Not Available | Positive | 2759851 - 2759924 | Not Available |
| lysm peptidoglycan-binding domain-containing protein | EYY28_14145 | Not Available | Negative | 2760003 - 2760758 | 26540.0 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | EYY28_14150 | Not Available | Positive | 2761172 - 2763469 | 82647.9 |
| xanthine dehydrogenase fad-binding subunit xdhb | EYY28_14155 | Not Available | Positive | 2763480 - 2764358 | 31528.6 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | EYY28_14160 | Not Available | Positive | 2764355 - 2764834 | 16891.8 |
| sigma-54-dependent transcriptional regulator | EYY28_14165 | Not Available | Negative | 2764873 - 2766651 | 66028.9 |
| knotted carbamoyltransferase ygew | EYY28_14170 | Not Available | Positive | 2767130 - 2768317 | 44058.7 |
Pathways
873 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




