Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent109 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1254319 bp
Thymine Count
1243861 bp
Guanine Count
1245555 bp
Cytosine Count
1290443 bp
Genome Length
5034178 bp
Protein-coding Genes
4544 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | EYY28_13960 | Not Available | Positive | 2731254 - 2732672 | 52093.4 |
| tagaturonate reductase | EYY28_13965 | Not Available | Positive | 2732899 - 2734350 | 54807.4 |
| bestrophin family inner membrane protein | EYY28_13970 | Not Available | Positive | 2734547 - 2735461 | 34811.0 |
| trans-aconitate 2-methyltransferase | EYY28_13975 | Not Available | Negative | 2735465 - 2736223 | 28994.5 |
| type ii toxin-antitoxin system antitoxin hipb | EYY28_13980 | Not Available | Positive | 2736531 - 2736797 | 9987.87 |
| type ii toxin-antitoxin system hipa family toxin | EYY28_13985 | Not Available | Positive | 2736814 - 2737434 | 22848.7 |
| regulator with hipb | EYY28_13990 | Not Available | Positive | 2737474 - 2737674 | 7728.48 |
| fimbrial protein | EYY28_14000 | Not Available | Positive | 2738346 - 2738909 | 19113.5 |
| fimbrial chaperone protein fimc | EYY28_14005 | Not Available | Positive | 2739271 - 2739981 | 26177.8 |
| fimbrial biogenesis outer membrane usher protein | EYY28_14010 | Not Available | Positive | 2740023 - 2742674 | 96566.2 |
Pathways
524 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




