Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent109 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1254319 bp
Thymine Count
1243861 bp
Guanine Count
1245555 bp
Cytosine Count
1290443 bp
Genome Length
5034178 bp
Protein-coding Genes
4544 genes
Non-Coding Genes
359 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate kinase family protein | EYY28_12630 | Not Available | Positive | 2486462 - 2487409 | 34194.3 |
| nadh-dependent methylglyoxal reductase | EYY28_12635 | Not Available | Positive | 2487419 - 2488399 | 36258.9 |
| deor/glpr transcriptional regulator | EYY28_12640 | Not Available | Positive | 2488536 - 2489294 | 28252.0 |
| mfs transporter | EYY28_12645 | Not Available | Positive | 2489412 - 2490770 | 50284.0 |
| bifunctional nicotinamidase/pyrazinamidase | EYY28_12650 | Not Available | Negative | 2490863 - 2491504 | 23335.4 |
| asparaginase | EYY28_12655 | Not Available | Negative | 2491515 - 2492531 | 37057.4 |
| simpl domain-containing protein | EYY28_12660 | Not Available | Negative | 2492663 - 2493373 | 25271.9 |
| signal peptide peptidase sppa | EYY28_12665 | Not Available | Negative | 2493489 - 2495345 | 67234.9 |
| nad(p)h nitroreductase | EYY28_12670 | Not Available | Positive | 2495506 - 2496057 | 20059.2 |
| selenide, water dikinase seld | EYY28_12675 | Not Available | Positive | 2496174 - 2497217 | 36691.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




