Ilyomonas limi strain 17mud1-8

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Ilyomonas

Description

Ilyomonas limi strain 17mud1-8 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number SZQL00000000.1, providing a reference point for researchers interested in studying its genetic and phenotypic traits. As a member of the Ilyomonas genus, Ilyomonas limi is expected to play a role in various ecological contexts, particularly in freshwater environments where it can contribute to the microbial community dynamics. The presence of a single replicon suggests a streamlined genomic organization, which may confer adaptive advantages in specific ecological niches or under particular environmental stresses. Understanding the genomic architecture and characteristics of Ilyomonas limi strain 17mud1-8 can provide insights into its ecological roles, including its potential involvement in nutrient cycling and interactions with other microorganisms. Such traits are crucial for comprehending the microbial ecology of freshwater habitats, where members of the Ilyomonas genus may influence both biogeochemical processes and the overall health of the ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusIlyomonas
SpeciesIlyomonas limi
Strainstrain 17mud1-8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ilyomonas limi strain 17mud1-8 contig70, whole genome shotgun

Gene Summary

Adenine Count

0 bp

Thymine Count

0 bp

Guanine Count

0 bp

Cytosine Count

0 bp

Genome Length

0 bp

Protein-coding Genes

4609 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinFC093_07900Not AvailablePositive1969710 - 197065735213.0
diphthine--ammonia ligaseFC093_07905Not AvailablePositive1970715 - 197143727424.7
carboxymuconolactone decarboxylase family proteinFC093_07910Not AvailablePositive1971925 - 197239817916.5
transcription initiation proteinFC093_07915Not AvailablePositive1972448 - 197278612367.9
sigma-70 family rna polymerase sigma factorFC093_07920Not AvailablePositive1972835 - 197407347339.2
hypothetical proteinFC093_07925Not AvailablePositive1974237 - 19744678130.06
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseFC093_07930Not AvailablePositive1974599 - 197582545777.4
yebc/pmpr family dna-binding transcriptional regulatorFC093_07935Not AvailableNegative1975987 - 197669726490.6
amino acid permeaseFC093_07940Not AvailableNegative1977029 - 197867858786.2
dicarboxylate/amino acid:cation symporterFC093_07945Not AvailablePositive1978860 - 198009243882.2

Displaying genes 1561 – 1570 of 4657 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.