Lysinibacillus varians strain NBRC 109424

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Lysinibacillus

Description

Lysinibacillus varians strain NBRC 109424 is characterized by having a single replicon, which is a feature that can influence its genetic stability and replication processes. The strain is cataloged under the accession number SZPV00000000.1, which serves as a unique identifier for its genomic data in biological databases. As a member of the Lysinibacillus genus, this strain is likely to exhibit traits common to its relatives, such as the ability to thrive in diverse environments and potentially contribute to soil health through various biological processes. The presence of only one replicon might suggest a streamlined genomic architecture that could facilitate efficient cellular functions, although specific metabolic pathways and ecological roles were not provided. The ecological implications of Lysinibacillus varians strain NBRC 109424 may include its potential role in nutrient cycling within its environment, especially in soil ecosystems. Bacteria of this genus often engage in interactions with plants and other soil microorganisms, contributing to the overall biodiversity and functioning of terrestrial habitats. In summary, Lysinibacillus varians strain NBRC 109424 is defined by its single replicon and unique genomic accession. Its ecological significance likely lies in its interactions within soil ecosystems, although further studies would be necessary to fully elucidate its functional roles and contributions to microbial communities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusLysinibacillus
SpeciesLysinibacillus varians
Strainstrain NBRC 109424

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysinibacillus varians strain NBRC 109424
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysinibacillus varians strain NBRC 109424 contig_76_16S, whole

Gene Summary

Adenine Count

1449698 bp

Thymine Count

1452317 bp

Guanine Count

845684 bp

Cytosine Count

861871 bp

Genome Length

4609570 bp

Protein-coding Genes

4142 genes

Non-Coding Genes

326 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l28FC752_10745Not AvailablePositive2223467 - 22236556982.69
stage v sporulation protein spovmFC752_10750Not AvailableNegative2223775 - 22238794024.0
thiamine diphosphokinaseFC752_10755Not AvailableNegative2223898 - 222455124387.9
ribulose-phosphate 3-epimeraseFC752_10760Not AvailableNegative2224548 - 222521624046.4
ribosome small subunit-dependent gtpase aFC752_10765Not AvailableNegative2225219 - 222610333439.2
stk1 family pasta domain-containing ser/thr kinaseFC752_10770Not AvailableNegative2226115 - 222808573441.1
stp1/irep family pp2c-type ser/thr phosphataseFC752_10775Not AvailableNegative2228088 - 222883727763.9
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnFC752_10780Not AvailableNegative2228844 - 222998643408.1
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbFC752_10785Not AvailableNegative2229986 - 223134750573.0
methionyl-trna formyltransferaseFC752_10790Not AvailableNegative2231344 - 223228534329.3

Displaying genes 2331 – 2340 of 4468 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.