Lysinibacillus varians strain NBRC 109424

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Lysinibacillus

Description

Lysinibacillus varians strain NBRC 109424 is characterized by having a single replicon, which is a feature that can influence its genetic stability and replication processes. The strain is cataloged under the accession number SZPV00000000.1, which serves as a unique identifier for its genomic data in biological databases. As a member of the Lysinibacillus genus, this strain is likely to exhibit traits common to its relatives, such as the ability to thrive in diverse environments and potentially contribute to soil health through various biological processes. The presence of only one replicon might suggest a streamlined genomic architecture that could facilitate efficient cellular functions, although specific metabolic pathways and ecological roles were not provided. The ecological implications of Lysinibacillus varians strain NBRC 109424 may include its potential role in nutrient cycling within its environment, especially in soil ecosystems. Bacteria of this genus often engage in interactions with plants and other soil microorganisms, contributing to the overall biodiversity and functioning of terrestrial habitats. In summary, Lysinibacillus varians strain NBRC 109424 is defined by its single replicon and unique genomic accession. Its ecological significance likely lies in its interactions within soil ecosystems, although further studies would be necessary to fully elucidate its functional roles and contributions to microbial communities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusLysinibacillus
SpeciesLysinibacillus varians
Strainstrain NBRC 109424

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysinibacillus varians strain NBRC 109424
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysinibacillus varians strain NBRC 109424 contig_76_16S, whole

Gene Summary

Adenine Count

1449698 bp

Thymine Count

1452317 bp

Guanine Count

845684 bp

Cytosine Count

861871 bp

Genome Length

4609570 bp

Protein-coding Genes

4142 genes

Non-Coding Genes

326 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseFC752_07490Not AvailableNegative1541412 - 154210725808.3
pin/tram domain-containing proteinFC752_07495Not AvailableNegative1542120 - 154320540123.2
dna repair protein radaFC752_07500Not AvailableNegative1543507 - 154488350047.9
atp-dependent clp protease atp-binding subunitFC752_07505Not AvailableNegative1544994 - 154743890351.6
protein arginine kinaseFC752_07510Not AvailableNegative1547428 - 154853741505.1
nucleotide excision repair proteinFC752_07515Not AvailableNegative1548534 - 154907620677.5
ctsr family transcriptional regulatorFC752_07520Not AvailableNegative1549090 - 154956017692.6
duf4870 domain-containing proteinFC752_07525Not AvailableNegative1549809 - 155011411329.5
class i sam-dependent methyltransferaseFC752_07530Not AvailablePositive1550239 - 155091625281.2
magnesium/cobalt transporter coraFC752_07535Not AvailablePositive1551077 - 155203938486.9

Displaying genes 1691 – 1700 of 4468 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.