Vibrio sp. F13 strain 10N.222.48.F5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.48.F5 is characterized by having a single replicon, which is significant in understanding its genetic structure and stability. The strain is cataloged under the accession number SYVL00000000.1, indicating its availability in genomic databases for further research and reference. The single replicon feature may suggest a streamlined genomic organization, potentially impacting its adaptability and evolutionary mechanisms. In the context of Vibrio species, which are known to inhabit diverse aquatic environments, this trait could influence the strain's ecological niche or its interaction with other microorganisms. Vibrio species, including strain F13, are often associated with marine ecosystems, and their genetic characteristics can provide insights into their roles in nutrient cycling and their responses to environmental stresses. The genomic data associated with the strain, while limited, can serve as a foundation for further studies aimed at understanding its physiological properties and ecological functions. In summary, Vibrio sp. F13 strain 10N.222.48.F5, with its single replicon and associated genomic data, presents opportunities for future research into its ecological roles and adaptability in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.48.F5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.48.F5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.48.F5 10N.222.48.F5_contig_397,

Gene Summary

Adenine Count

1461764 bp

Thymine Count

1459187 bp

Guanine Count

1166712 bp

Cytosine Count

1156143 bp

Genome Length

5262506 bp

Protein-coding Genes

4568 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinFCV76_16235Not AvailablePositive3708795 - 371064568467.3
duf445 domain-containing proteinFCV76_16240Not AvailablePositive3710932 - 371163625786.7
winged helix-turn-helix transcriptional regulatorFCV76_16245Not AvailableNegative3711745 - 371223318474.7
hypothetical proteinFCV76_16250Not AvailableNegative3712745 - 37129698420.2
hypothetical proteinFCV76_16255Not AvailableNegative3713298 - 371416131328.9
helix-turn-helix domain-containing proteinFCV76_16260Not AvailableNegative3714283 - 371517334123.9
arac family transcriptional regulatorFCV76_16270Not AvailablePositive3716041 - 371686530113.2
bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase putaFCV76_16275Not AvailablePositive3717047 - 3720184114968.0
1-pyrroline-5-carboxylate dehydrogenaseFCV76_16280Not AvailablePositive3720196 - 372090024893.2
sodium/proline symporter putpFCV76_16285Not AvailablePositive3721084 - 372257453256.5

Displaying genes 3171 – 3180 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.