Vibrio sp. F13 strain 10N.222.48.F5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.48.F5 is characterized by having a single replicon, which is significant in understanding its genetic structure and stability. The strain is cataloged under the accession number SYVL00000000.1, indicating its availability in genomic databases for further research and reference. The single replicon feature may suggest a streamlined genomic organization, potentially impacting its adaptability and evolutionary mechanisms. In the context of Vibrio species, which are known to inhabit diverse aquatic environments, this trait could influence the strain's ecological niche or its interaction with other microorganisms. Vibrio species, including strain F13, are often associated with marine ecosystems, and their genetic characteristics can provide insights into their roles in nutrient cycling and their responses to environmental stresses. The genomic data associated with the strain, while limited, can serve as a foundation for further studies aimed at understanding its physiological properties and ecological functions. In summary, Vibrio sp. F13 strain 10N.222.48.F5, with its single replicon and associated genomic data, presents opportunities for future research into its ecological roles and adaptability in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.48.F5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.48.F5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.48.F5 10N.222.48.F5_contig_397,

Gene Summary

Adenine Count

1461764 bp

Thymine Count

1459187 bp

Guanine Count

1166712 bp

Cytosine Count

1156143 bp

Genome Length

5262506 bp

Protein-coding Genes

4568 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l3 n(5)-glutamine methyltransferaseFCV76_11890Not AvailableNegative2750447 - 275137935088.7
endonuclease smrbFCV76_11895Not AvailablePositive2751442 - 275197219944.9
phosphohistidine phosphatase sixaFCV76_11900Not AvailableNegative2752084 - 275254817022.4
insulinase family proteinFCV76_11905Not AvailablePositive2752854 - 2755631105785.0
fatty acid oxidation complex subunit alpha fadjFCV76_11910Not AvailableNegative2755935 - 275815180663.7
acetyl-coa c-acyltransferase fadiFCV76_11915Not AvailableNegative2758151 - 275945846259.1
sigma-70 family rna polymerase sigma factorFCV76_11920Not AvailablePositive2759985 - 276056022523.8
duf3379 domain-containing proteinFCV76_11925Not AvailablePositive2760553 - 276128126498.5
transporterFCV76_11930Not AvailablePositive2761579 - 276284745646.7
aromatic hydrocarbon degradation proteinFCV76_11935Not AvailablePositive2763144 - 276443045929.5

Displaying genes 2361 – 2370 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.