Vibrio sp. F13 strain 10N.222.48.F5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.48.F5 is characterized by having a single replicon, which is significant in understanding its genetic structure and stability. The strain is cataloged under the accession number SYVL00000000.1, indicating its availability in genomic databases for further research and reference. The single replicon feature may suggest a streamlined genomic organization, potentially impacting its adaptability and evolutionary mechanisms. In the context of Vibrio species, which are known to inhabit diverse aquatic environments, this trait could influence the strain's ecological niche or its interaction with other microorganisms. Vibrio species, including strain F13, are often associated with marine ecosystems, and their genetic characteristics can provide insights into their roles in nutrient cycling and their responses to environmental stresses. The genomic data associated with the strain, while limited, can serve as a foundation for further studies aimed at understanding its physiological properties and ecological functions. In summary, Vibrio sp. F13 strain 10N.222.48.F5, with its single replicon and associated genomic data, presents opportunities for future research into its ecological roles and adaptability in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.48.F5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.48.F5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.48.F5 10N.222.48.F5_contig_397,

Gene Summary

Adenine Count

1461764 bp

Thymine Count

1459187 bp

Guanine Count

1166712 bp

Cytosine Count

1156143 bp

Genome Length

5262506 bp

Protein-coding Genes

4568 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
co-chaperone hscbFCV76_09685Not AvailablePositive2231034 - 223154919834.6
fe-s protein assembly chaperone hscaFCV76_09690Not AvailablePositive2231572 - 223342265908.4
isc system 2fe-2s type ferredoxinFCV76_09695Not AvailablePositive2233443 - 223378112184.5
fe-s cluster assembly protein iscxFCV76_09700Not AvailablePositive2233916 - 22341167912.27
aminopeptidase pepbFCV76_09705Not AvailablePositive2234323 - 223561846272.0
nucleoside-diphosphate kinaseFCV76_09710Not AvailablePositive2235725 - 223615916163.3
bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmnFCV76_09715Not AvailablePositive2236601 - 223774342735.5
cytoskeleton protein rodzFCV76_09720Not AvailablePositive2238184 - 223914034499.1
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseFCV76_09725Not AvailablePositive2239148 - 224026940609.8
histidine--trna ligaseFCV76_09730Not AvailablePositive2240340 - 224160847090.3

Displaying genes 1931 – 1940 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.