Vibrio sp. F13 strain 10N.222.48.F5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.48.F5 is characterized by having a single replicon, which is significant in understanding its genetic structure and stability. The strain is cataloged under the accession number SYVL00000000.1, indicating its availability in genomic databases for further research and reference. The single replicon feature may suggest a streamlined genomic organization, potentially impacting its adaptability and evolutionary mechanisms. In the context of Vibrio species, which are known to inhabit diverse aquatic environments, this trait could influence the strain's ecological niche or its interaction with other microorganisms. Vibrio species, including strain F13, are often associated with marine ecosystems, and their genetic characteristics can provide insights into their roles in nutrient cycling and their responses to environmental stresses. The genomic data associated with the strain, while limited, can serve as a foundation for further studies aimed at understanding its physiological properties and ecological functions. In summary, Vibrio sp. F13 strain 10N.222.48.F5, with its single replicon and associated genomic data, presents opportunities for future research into its ecological roles and adaptability in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.48.F5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.48.F5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.48.F5 10N.222.48.F5_contig_397,

Gene Summary

Adenine Count

1461764 bp

Thymine Count

1459187 bp

Guanine Count

1166712 bp

Cytosine Count

1156143 bp

Genome Length

5262506 bp

Protein-coding Genes

4568 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3'-5' exonucleaseFCV76_06970Not AvailablePositive1585584 - 158630026993.5
porinFCV76_06975Not AvailableNegative1586439 - 158711325873.7
alginate lyaseFCV76_06980Not AvailableNegative1587190 - 158844947682.8
toxin-antitoxin system ywqk family antitoxinFCV76_06985Not AvailableNegative1589400 - 159001122762.3
transporterFCV76_06990Not AvailablePositive1590521 - 159229364941.3
alginate lyaseFCV76_06995Not AvailablePositive1592379 - 159399559143.0
peptide-methionine (s)-s-oxide reductaseFCV76_07000Not AvailableNegative1594175 - 159468719196.2
duf697 domain-containing proteinFCV76_07005Not AvailablePositive1594927 - 159604240954.7
gtp-binding proteinFCV76_07010Not AvailablePositive1596029 - 159770562318.2
tryptophanaseFCV76_07015Not AvailablePositive1598557 - 160002954615.2

Displaying genes 1411 – 1420 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.