Vibrio sp. F13 strain 10N.222.48.F5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.48.F5 is characterized by having a single replicon, which is significant in understanding its genetic structure and stability. The strain is cataloged under the accession number SYVL00000000.1, indicating its availability in genomic databases for further research and reference. The single replicon feature may suggest a streamlined genomic organization, potentially impacting its adaptability and evolutionary mechanisms. In the context of Vibrio species, which are known to inhabit diverse aquatic environments, this trait could influence the strain's ecological niche or its interaction with other microorganisms. Vibrio species, including strain F13, are often associated with marine ecosystems, and their genetic characteristics can provide insights into their roles in nutrient cycling and their responses to environmental stresses. The genomic data associated with the strain, while limited, can serve as a foundation for further studies aimed at understanding its physiological properties and ecological functions. In summary, Vibrio sp. F13 strain 10N.222.48.F5, with its single replicon and associated genomic data, presents opportunities for future research into its ecological roles and adaptability in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.48.F5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.48.F5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.48.F5 10N.222.48.F5_contig_397,

Gene Summary

Adenine Count

1461764 bp

Thymine Count

1459187 bp

Guanine Count

1166712 bp

Cytosine Count

1156143 bp

Genome Length

5262506 bp

Protein-coding Genes

4568 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system f family proteinFCV76_05585Not AvailableNegative1245474 - 124670345282.1
type iv-a pilus assembly atpase pilbFCV76_05590Not AvailableNegative1246719 - 124840462245.6
pilinFCV76_05595Not AvailableNegative1248410 - 124882014329.2
carboxylating nicotinate-nucleotide diphosphorylaseFCV76_05600Not AvailableNegative1249076 - 124996632090.5
1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampdFCV76_05605Not AvailablePositive1250050 - 125064922485.5
pyruvate dehydrogenase complex transcriptional repressor pdhrFCV76_05615Not AvailablePositive1251133 - 125189428709.5
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeFCV76_05620Not AvailablePositive1251957 - 125462099077.6
pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferaseFCV76_05625Not AvailablePositive1254647 - 125657566312.2
dihydrolipoyl dehydrogenaseFCV76_05630Not AvailablePositive1256818 - 125824850903.6
tetr/acrr family transcriptional regulatorFCV76_05635Not AvailableNegative1258454 - 125905923209.7

Displaying genes 1141 – 1150 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.