Vibrio sp. F13 strain 10N.222.54.B8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.54.B8 is characterized by having a single replicon, which is indicative of its genomic structure. The genomic data for this strain can be accessed through the accession number SYVF00000000.1. This unique trait of having one replicon may suggest a streamlined genomic organization that could impact its adaptability and evolutionary potential within its ecological niche. Vibrio species are commonly found in marine environments, often associated with aquatic organisms and can play significant roles in nutrient cycling. The presence of a single replicon in Vibrio sp. F13 strain 10N.222.54.B8 could influence its replication and stability in fluctuating environmental conditions. The genomic configuration may also provide advantages for survival in specific habitats, potentially allowing the strain to thrive in competitive environments. Understanding the genomic characteristics of Vibrio sp. F13 strain 10N.222.54.B8 contributes to the broader knowledge of Vibrio species, particularly regarding their ecological roles and interactions within marine ecosystems. The ability to study such strains can yield insights into their metabolic capabilities and interactions with other microorganisms, which are crucial for maintaining ecological balance in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.54.B8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.54.B8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.54.B8 10N.222.54.B8_contig_188,

Gene Summary

Adenine Count

1380867 bp

Thymine Count

1385300 bp

Guanine Count

1107672 bp

Cytosine Count

1109279 bp

Genome Length

5012718 bp

Protein-coding Genes

4325 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ggdef domain-containing proteinFCV55_22305Not AvailableNegative4941023 - 494298174111.2
m20/m25/m40 family metallo-hydrolaseFCV55_22310Not AvailablePositive4943243 - 494434939327.9
atp-dependent chaperone clpbFCV55_22315Not AvailableNegative4944944 - 494751795925.3
peptidoglycan editing factor pgefFCV55_22320Not AvailableNegative4947660 - 494840026391.2
23s rrna pseudouridine(1911/1915/1917) synthase rludFCV55_22325Not AvailableNegative4948403 - 494937736410.1
outer membrane protein assembly factor bamdFCV55_22330Not AvailablePositive4949515 - 495024327739.1
transporterFCV55_22335Not AvailablePositive4950848 - 495262664666.1
pts fructose transporter subunit iiaFCV55_22340Not AvailableNegative4952782 - 495355528801.9
pts fructose transporter subunit iibFCV55_22345Not AvailableNegative4953563 - 495386510861.4
pts fructose transporter subunit iiaFCV55_22350Not AvailablePositive4954194 - 495605965756.3

Displaying genes 4351 – 4360 of 4427 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.