Vibrio sp. F13 strain 10N.222.54.B8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.54.B8 is characterized by having a single replicon, which is indicative of its genomic structure. The genomic data for this strain can be accessed through the accession number SYVF00000000.1. This unique trait of having one replicon may suggest a streamlined genomic organization that could impact its adaptability and evolutionary potential within its ecological niche. Vibrio species are commonly found in marine environments, often associated with aquatic organisms and can play significant roles in nutrient cycling. The presence of a single replicon in Vibrio sp. F13 strain 10N.222.54.B8 could influence its replication and stability in fluctuating environmental conditions. The genomic configuration may also provide advantages for survival in specific habitats, potentially allowing the strain to thrive in competitive environments. Understanding the genomic characteristics of Vibrio sp. F13 strain 10N.222.54.B8 contributes to the broader knowledge of Vibrio species, particularly regarding their ecological roles and interactions within marine ecosystems. The ability to study such strains can yield insights into their metabolic capabilities and interactions with other microorganisms, which are crucial for maintaining ecological balance in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.54.B8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.54.B8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.54.B8 10N.222.54.B8_contig_188,

Gene Summary

Adenine Count

1380867 bp

Thymine Count

1385300 bp

Guanine Count

1107672 bp

Cytosine Count

1109279 bp

Genome Length

5012718 bp

Protein-coding Genes

4325 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseFCV55_21240Not AvailablePositive4734633 - 473622557355.0
phosphoribosylamine--glycine ligaseFCV55_21245Not AvailablePositive4736440 - 473772945609.1
transposaseFCV55_21250Not AvailablePositive4737804 - 473821115667.5
is630 family transposaseFCV55_21255Not AvailablePositive4739166 - 47393878610.01
hypothetical proteinFCV55_21260Not AvailablePositive4739388 - 47396339648.8
dtw domain-containing proteinFCV55_21265Not AvailableNegative4739626 - 474022222397.7
hypothetical proteinFCV55_21270Not AvailableNegative4740225 - 474176956795.1
eve domain-containing proteinFCV55_21275Not AvailablePositive4741809 - 474227618019.8
cof-type had-iib family hydrolaseFCV55_21280Not AvailableNegative4742364 - 474319130645.5
alpha/beta fold hydrolaseFCV55_21285Not AvailableNegative4743374 - 474435437799.6

Displaying genes 4141 – 4150 of 4427 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.