Vibrio sp. F13 strain 10N.222.54.B8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.54.B8 is characterized by having a single replicon, which is indicative of its genomic structure. The genomic data for this strain can be accessed through the accession number SYVF00000000.1. This unique trait of having one replicon may suggest a streamlined genomic organization that could impact its adaptability and evolutionary potential within its ecological niche. Vibrio species are commonly found in marine environments, often associated with aquatic organisms and can play significant roles in nutrient cycling. The presence of a single replicon in Vibrio sp. F13 strain 10N.222.54.B8 could influence its replication and stability in fluctuating environmental conditions. The genomic configuration may also provide advantages for survival in specific habitats, potentially allowing the strain to thrive in competitive environments. Understanding the genomic characteristics of Vibrio sp. F13 strain 10N.222.54.B8 contributes to the broader knowledge of Vibrio species, particularly regarding their ecological roles and interactions within marine ecosystems. The ability to study such strains can yield insights into their metabolic capabilities and interactions with other microorganisms, which are crucial for maintaining ecological balance in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.54.B8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.54.B8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.54.B8 10N.222.54.B8_contig_188,

Gene Summary

Adenine Count

1380867 bp

Thymine Count

1385300 bp

Guanine Count

1107672 bp

Cytosine Count

1109279 bp

Genome Length

5012718 bp

Protein-coding Genes

4325 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonucleoside-diphosphate reductase subunit alphaFCV55_01845Not AvailableNegative405955 - 40823785644.4
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigFCV55_01850Not AvailableNegative408746 - 40945626410.8
dna topoisomerase (atp-hydrolyzing) subunit aFCV55_01855Not AvailablePositive409748 - 41239097243.1
tetratricopeptide repeat proteinFCV55_01860Not AvailablePositive412560 - 41318923480.2
rhodanese-like domain-containing proteinFCV55_01865Not AvailableNegative413215 - 41355912447.8
ammonia-forming nitrite reductase cytochrome c552 subunitFCV55_01870Not AvailableNegative413685 - 41507352152.1
cytochrome c nitrite reductase pentaheme subunitFCV55_01875Not AvailablePositive415598 - 41618221503.4
cytochrome c nitrite reductase fe-s proteinFCV55_01880Not AvailablePositive416186 - 41687224933.7
cytochrome c nitrite reductase subunit nrfdFCV55_01885Not AvailablePositive416875 - 41784935913.9
heme lyase ccmf/nrfe family subunitFCV55_01890Not AvailablePositive418017 - 41992170180.6

Displaying genes 371 – 380 of 4427 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.