Vibrio sp. F13 strain 10N.222.54.B8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.54.B8 is characterized by having a single replicon, which is indicative of its genomic structure. The genomic data for this strain can be accessed through the accession number SYVF00000000.1. This unique trait of having one replicon may suggest a streamlined genomic organization that could impact its adaptability and evolutionary potential within its ecological niche. Vibrio species are commonly found in marine environments, often associated with aquatic organisms and can play significant roles in nutrient cycling. The presence of a single replicon in Vibrio sp. F13 strain 10N.222.54.B8 could influence its replication and stability in fluctuating environmental conditions. The genomic configuration may also provide advantages for survival in specific habitats, potentially allowing the strain to thrive in competitive environments. Understanding the genomic characteristics of Vibrio sp. F13 strain 10N.222.54.B8 contributes to the broader knowledge of Vibrio species, particularly regarding their ecological roles and interactions within marine ecosystems. The ability to study such strains can yield insights into their metabolic capabilities and interactions with other microorganisms, which are crucial for maintaining ecological balance in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.54.B8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.54.B8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.54.B8 10N.222.54.B8_contig_188,

Gene Summary

Adenine Count

1380867 bp

Thymine Count

1385300 bp

Guanine Count

1107672 bp

Cytosine Count

1109279 bp

Genome Length

5012718 bp

Protein-coding Genes

4325 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fe-s cluster assembly transcriptional regulator iscrFCV55_05600Not AvailableNegative1237476 - 123799718413.8
trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmjFCV55_05605Not AvailableNegative1238114 - 123884226949.4
inositol-1-monophosphataseFCV55_05610Not AvailablePositive1239024 - 123982729150.9
protein translocase subunit secfFCV55_05615Not AvailableNegative1240875 - 124182234281.1
protein translocase subunit secdFCV55_05620Not AvailableNegative1241837 - 124369366629.9
preprotein translocase subunit yajcFCV55_05625Not AvailableNegative1243714 - 124404311783.6
trna guanosine(34) transglycosylase tgtFCV55_05630Not AvailableNegative1244155 - 124529143051.5
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaFCV55_05635Not AvailableNegative1245487 - 124653938875.1
cbs domain-containing proteinFCV55_05640Not AvailablePositive1246874 - 124732016561.0
hydrogen peroxide-inducible genes activatorFCV55_05645Not AvailableNegative1247390 - 124829533609.6

Displaying genes 1091 – 1100 of 4427 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.