Vibrio sp. F13 strain 10N.222.55.A11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.55.A11 is characterized by possessing a single replicon, which is a significant trait regarding its genomic structure and replication characteristics. The strain is cataloged under the accession number SYVE00000000.1, indicating its sequence data is publicly available for further studies and comparisons. The presence of a single replicon suggests a streamlined genetic organization, which may facilitate efficient replication and adaptation to varying environmental conditions. This can be particularly important for Vibrio species, which are commonly found in marine environments and can exhibit diverse metabolic strategies. Understanding the genomic characteristics of Vibrio sp. F13 strain 10N.222.55.A11 can provide insights into its ecological roles, including its interactions within marine ecosystems. The single replicon could also imply a potential for rapid adaptation in response to environmental changes, which is a common trait among Vibrio species that thrive in fluctuating habitats. Overall, while specific traits and ecological roles of Vibrio sp. F13 strain 10N.222.55.A11 remain limited in the provided data, the genomic simplicity suggested by its single replicon emphasizes the organism's potential adaptability in its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.55.A11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.55.A11
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.55.A11 10N.222.55.A11_contig_157,

Gene Summary

Adenine Count

1376663 bp

Thymine Count

1366888 bp

Guanine Count

1101789 bp

Cytosine Count

1099206 bp

Genome Length

4963358 bp

Protein-coding Genes

4261 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseFCV58_20725Not AvailableNegative4644247 - 464678793523.1
abc transporter atp-binding proteinFCV58_20730Not AvailableNegative4646796 - 464749425133.0
bifunctional metallophosphatase/5'-nucleotidaseFCV58_20735Not AvailableNegative4648237 - 465014170795.7
zinc-dependent alcohol dehydrogenase family proteinFCV58_20740Not AvailableNegative4650443 - 465143236873.7
phytanoyl-coa dioxygenase family proteinFCV58_20745Not AvailableNegative4651453 - 465224130384.6
ggdef domain-containing proteinFCV58_20750Not AvailablePositive4652547 - 465375544694.6
dmt family transporterFCV58_20755Not AvailableNegative4653724 - 465460532071.2
mfs transporterFCV58_20760Not AvailableNegative4654749 - 465608050191.5
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdudFCV58_20765Not AvailablePositive4656398 - 465715927122.2
hypothetical proteinFCV58_20770Not AvailablePositive4657213 - 465785123118.7

Displaying genes 4051 – 4060 of 4366 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.