Vibrio sp. F13 strain 10N.222.55.A11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.55.A11 is characterized by possessing a single replicon, which is a significant trait regarding its genomic structure and replication characteristics. The strain is cataloged under the accession number SYVE00000000.1, indicating its sequence data is publicly available for further studies and comparisons. The presence of a single replicon suggests a streamlined genetic organization, which may facilitate efficient replication and adaptation to varying environmental conditions. This can be particularly important for Vibrio species, which are commonly found in marine environments and can exhibit diverse metabolic strategies. Understanding the genomic characteristics of Vibrio sp. F13 strain 10N.222.55.A11 can provide insights into its ecological roles, including its interactions within marine ecosystems. The single replicon could also imply a potential for rapid adaptation in response to environmental changes, which is a common trait among Vibrio species that thrive in fluctuating habitats. Overall, while specific traits and ecological roles of Vibrio sp. F13 strain 10N.222.55.A11 remain limited in the provided data, the genomic simplicity suggested by its single replicon emphasizes the organism's potential adaptability in its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.55.A11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.55.A11
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.55.A11 10N.222.55.A11_contig_157,

Gene Summary

Adenine Count

1376663 bp

Thymine Count

1366888 bp

Guanine Count

1101789 bp

Cytosine Count

1099206 bp

Genome Length

4963358 bp

Protein-coding Genes

4261 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mate family efflux transporter dinfFCV58_20300Not AvailablePositive4541188 - 454249247372.9
si-specific nad(p)(+) transhydrogenaseFCV58_20305Not AvailableNegative4542676 - 454407651122.4
hth-type transcriptional repressor fabrFCV58_20315Not AvailablePositive4544404 - 454504524580.7
yijd family membrane proteinFCV58_20320Not AvailablePositive4545045 - 454541613091.1
trna (uridine(54)-c5)-methyltransferase trmaFCV58_20325Not AvailableNegative4545497 - 454660643053.0
tonb-dependent vitamin b12 receptorFCV58_20330Not AvailablePositive4547005 - 454882267108.8
glutamate racemaseFCV58_20340Not AvailablePositive4549597 - 455040329218.7
rna-binding proteinFCV58_20345Not AvailableNegative4550366 - 455081816448.7
universal stress protein uspeFCV58_20350Not AvailableNegative4551269 - 455221935459.4
fumarate/nitrate reduction transcriptional regulator fnrFCV58_20355Not AvailableNegative4552352 - 455309827846.7

Displaying genes 3971 – 3980 of 4366 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.