Vibrio sp. F13 strain 10N.222.55.A11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.55.A11 is characterized by possessing a single replicon, which is a significant trait regarding its genomic structure and replication characteristics. The strain is cataloged under the accession number SYVE00000000.1, indicating its sequence data is publicly available for further studies and comparisons. The presence of a single replicon suggests a streamlined genetic organization, which may facilitate efficient replication and adaptation to varying environmental conditions. This can be particularly important for Vibrio species, which are commonly found in marine environments and can exhibit diverse metabolic strategies. Understanding the genomic characteristics of Vibrio sp. F13 strain 10N.222.55.A11 can provide insights into its ecological roles, including its interactions within marine ecosystems. The single replicon could also imply a potential for rapid adaptation in response to environmental changes, which is a common trait among Vibrio species that thrive in fluctuating habitats. Overall, while specific traits and ecological roles of Vibrio sp. F13 strain 10N.222.55.A11 remain limited in the provided data, the genomic simplicity suggested by its single replicon emphasizes the organism's potential adaptability in its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.55.A11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.55.A11
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.55.A11 10N.222.55.A11_contig_157,

Gene Summary

Adenine Count

1376663 bp

Thymine Count

1366888 bp

Guanine Count

1101789 bp

Cytosine Count

1099206 bp

Genome Length

4963358 bp

Protein-coding Genes

4261 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
9-hexadecenoic acid cis-trans isomeraseFCV58_19255Not AvailablePositive4300162 - 430251690053.4
lysr family transcriptional regulatorFCV58_19260Not AvailableNegative4302618 - 430355635367.3
cytosine permeaseFCV58_19265Not AvailablePositive4303650 - 430497546839.2
duf917 domain-containing proteinFCV58_19270Not AvailablePositive4304981 - 430610540254.5
hydantoinase/oxoprolinase family proteinFCV58_19275Not AvailablePositive4306110 - 430769056492.5
tmao reductase system sensor histidine kinase/response regulator torsFCV58_19280Not AvailableNegative4307826 - 4310831110759.0
tmao reductase system periplasmic protein tortFCV58_19285Not AvailablePositive4310924 - 431195237168.3
methylglyoxal synthaseFCV58_19290Not AvailablePositive4312013 - 431246817042.6
voc family proteinFCV58_19295Not AvailableNegative4312589 - 431293912975.0
dna helicase ivFCV58_19300Not AvailableNegative4313027 - 431510279563.6

Displaying genes 3771 – 3780 of 4366 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.