Vibrio sp. F13 strain 10N.222.55.A11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.55.A11 is characterized by possessing a single replicon, which is a significant trait regarding its genomic structure and replication characteristics. The strain is cataloged under the accession number SYVE00000000.1, indicating its sequence data is publicly available for further studies and comparisons. The presence of a single replicon suggests a streamlined genetic organization, which may facilitate efficient replication and adaptation to varying environmental conditions. This can be particularly important for Vibrio species, which are commonly found in marine environments and can exhibit diverse metabolic strategies. Understanding the genomic characteristics of Vibrio sp. F13 strain 10N.222.55.A11 can provide insights into its ecological roles, including its interactions within marine ecosystems. The single replicon could also imply a potential for rapid adaptation in response to environmental changes, which is a common trait among Vibrio species that thrive in fluctuating habitats. Overall, while specific traits and ecological roles of Vibrio sp. F13 strain 10N.222.55.A11 remain limited in the provided data, the genomic simplicity suggested by its single replicon emphasizes the organism's potential adaptability in its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.55.A11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.55.A11
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.55.A11 10N.222.55.A11_contig_157,

Gene Summary

Adenine Count

1376663 bp

Thymine Count

1366888 bp

Guanine Count

1101789 bp

Cytosine Count

1099206 bp

Genome Length

4963358 bp

Protein-coding Genes

4261 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutaredoxin family proteinFCV58_18265Not AvailableNegative4055182 - 40554189107.28
m48 family metallopeptidaseFCV58_18270Not AvailablePositive4055556 - 405605319382.8
23s rrna (adenine(1618)-n(6))-methyltransferase rlmfFCV58_18275Not AvailablePositive4056058 - 405738048578.7
type iv pilus biogenesis/stability protein pilwFCV58_18280Not AvailableNegative4057471 - 405823828704.9
homoserine o-succinyltransferaseFCV58_18285Not AvailableNegative4058406 - 405934736461.1
atp-binding proteinFCV58_18290Not AvailablePositive4059623 - 405999114291.1
duf3859 domain-containing proteinFCV58_18295Not AvailablePositive4060070 - 406049216192.2
m20/m25/m40 family metallo-hydrolaseFCV58_18300Not AvailableNegative4060601 - 406170739326.9
ggdef domain-containing proteinFCV58_18305Not AvailablePositive4061969 - 406392774096.3
hypothetical proteinFCV58_18310Not AvailableNegative4064063 - 40642486722.0

Displaying genes 3581 – 3590 of 4366 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.