Vibrio sp. F13 strain 10N.222.55.A11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.55.A11 is characterized by possessing a single replicon, which is a significant trait regarding its genomic structure and replication characteristics. The strain is cataloged under the accession number SYVE00000000.1, indicating its sequence data is publicly available for further studies and comparisons. The presence of a single replicon suggests a streamlined genetic organization, which may facilitate efficient replication and adaptation to varying environmental conditions. This can be particularly important for Vibrio species, which are commonly found in marine environments and can exhibit diverse metabolic strategies. Understanding the genomic characteristics of Vibrio sp. F13 strain 10N.222.55.A11 can provide insights into its ecological roles, including its interactions within marine ecosystems. The single replicon could also imply a potential for rapid adaptation in response to environmental changes, which is a common trait among Vibrio species that thrive in fluctuating habitats. Overall, while specific traits and ecological roles of Vibrio sp. F13 strain 10N.222.55.A11 remain limited in the provided data, the genomic simplicity suggested by its single replicon emphasizes the organism's potential adaptability in its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.55.A11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.55.A11
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.55.A11 10N.222.55.A11_contig_157,

Gene Summary

Adenine Count

1376663 bp

Thymine Count

1366888 bp

Guanine Count

1101789 bp

Cytosine Count

1099206 bp

Genome Length

4963358 bp

Protein-coding Genes

4261 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type 3 dihydrofolate reductaseFCV58_13780Not AvailablePositive3072415 - 307289418009.6
symmetrical bis(5'-nucleosyl)-tetraphosphataseFCV58_13785Not AvailableNegative3072969 - 307377230956.1
co2+/mg2+ efflux protein apagFCV58_13790Not AvailableNegative3073802 - 307418214217.0
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaFCV58_13795Not AvailableNegative3074271 - 307508631058.7
4-hydroxythreonine-4-phosphate dehydrogenase pdxaFCV58_13800Not AvailableNegative3075083 - 307607535550.9
peptidylprolyl isomerase suraFCV58_13805Not AvailableNegative3076062 - 307736048129.9
lps assembly protein lptdFCV58_13810Not AvailableNegative3077404 - 307974087906.6
co-chaperone djlaFCV58_13815Not AvailablePositive3079890 - 308074431360.5
duf924 domain-containing proteinFCV58_13820Not AvailablePositive3080802 - 308134720799.5
duf547 domain-containing proteinFCV58_13825Not AvailableNegative3081443 - 308222529935.3

Displaying genes 2711 – 2720 of 4366 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.