Vibrio sp. F13 strain 10N.222.55.A2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.55.A2 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The accession number for this strain is SYVD00000000.1, indicating its entry in a genomic database for reference purposes. The presence of a single replicon suggests a streamlined genomic organization, which can be advantageous for adapting to specific environmental conditions. Vibrio species are commonly found in marine environments, and their adaptability often plays a crucial role in their ecological interactions. The genetic traits of Vibrio sp. F13 strain 10N.222.55.A2 may contribute to its survival and competitive abilities within its habitat. Understanding the genomic composition and structure of this strain can provide insights into its metabolic capabilities, potential pathogenicity, and ecological roles in aquatic ecosystems. The streamlined genome may allow for efficient resource utilization, which can be a competitive advantage in nutrient-variable environments. Further research into this strain can elucidate its specific ecological interactions and contributions to microbial communities in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.55.A2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.55.A2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.55.A2 10N.222.55.A2_contig_156,

Gene Summary

Adenine Count

1385539 bp

Thymine Count

1384398 bp

Guanine Count

1119171 bp

Cytosine Count

1100471 bp

Genome Length

5020869 bp

Protein-coding Genes

4295 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFCV60_01765Not AvailablePositive388321 - 38877017414.6
protein kinaseFCV60_01770Not AvailableNegative388899 - 39013745934.0
tetr/acrr family transcriptional regulatorFCV60_01775Not AvailableNegative390601 - 39117922128.6
coniferyl aldehyde dehydrogenaseFCV60_01780Not AvailableNegative391176 - 39261253521.5
arginine decarboxylaseFCV60_01785Not AvailablePositive393150 - 39505771413.8
agmatinaseFCV60_01790Not AvailablePositive395057 - 39598633653.1
retention module-containing proteinFCV60_01795Not AvailablePositive396646 - 416397697666.0
transporter substrate-binding domain-containing proteinFCV60_01800Not AvailableNegative416473 - 41723728278.6
transporterFCV60_01810Not AvailableNegative417493 - 41925964846.4
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseFCV60_01815Not AvailableNegative420110 - 42073622331.3

Displaying genes 351 – 360 of 4392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.