Vibrio sp. F13 strain 10N.222.55.A2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.55.A2 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The accession number for this strain is SYVD00000000.1, indicating its entry in a genomic database for reference purposes. The presence of a single replicon suggests a streamlined genomic organization, which can be advantageous for adapting to specific environmental conditions. Vibrio species are commonly found in marine environments, and their adaptability often plays a crucial role in their ecological interactions. The genetic traits of Vibrio sp. F13 strain 10N.222.55.A2 may contribute to its survival and competitive abilities within its habitat. Understanding the genomic composition and structure of this strain can provide insights into its metabolic capabilities, potential pathogenicity, and ecological roles in aquatic ecosystems. The streamlined genome may allow for efficient resource utilization, which can be a competitive advantage in nutrient-variable environments. Further research into this strain can elucidate its specific ecological interactions and contributions to microbial communities in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.55.A2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.55.A2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.55.A2 10N.222.55.A2_contig_156,

Gene Summary

Adenine Count

1385539 bp

Thymine Count

1384398 bp

Guanine Count

1119171 bp

Cytosine Count

1100471 bp

Genome Length

5020869 bp

Protein-coding Genes

4295 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysm peptidoglycan-binding domain-containing proteinFCV60_15805Not AvailablePositive3521726 - 352281740004.9
dna-protecting protein dpraFCV60_15810Not AvailablePositive3522814 - 352392640190.4
duf494 domain-containing proteinFCV60_15815Not AvailablePositive3523930 - 352440618616.4
dna topoisomeraseFCV60_15820Not AvailablePositive3524419 - 352498821334.6
5-(carboxyamino)imidazole ribonucleotide synthaseFCV60_15825Not AvailableNegative3525075 - 352620540971.9
5-(carboxyamino)imidazole ribonucleotide mutaseFCV60_15830Not AvailableNegative3526211 - 352669616556.2
threonylcarbamoyl-amp synthaseFCV60_15835Not AvailablePositive3526892 - 352744920375.4
oxygen-dependent coproporphyrinogen oxidaseFCV60_15840Not AvailablePositive3527469 - 352838634873.8
shikimate dehydrogenaseFCV60_15845Not AvailablePositive3528462 - 352929229809.5
duf1488 domain-containing proteinFCV60_15850Not AvailablePositive3529310 - 352957910119.8

Displaying genes 3091 – 3100 of 4392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.