Vibrio sp. F13 strain 10N.222.55.B10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.55.B10 is characterized by having a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number SYVC00000000.1, which provides a reference for genomic data and further studies. Vibrio species are known for their ecological roles, particularly in aquatic environments where they can contribute to nutrient cycling and serve as indicators of environmental health. Given its classification as a Vibrio, strain 10N.222.55.B10 may play a significant role in marine ecosystems, potentially influencing microbial communities and interactions within those habitats. Understanding the genomic organization and traits of Vibrio sp. F13 strain 10N.222.55.B10 can shed light on its ecological functions and adaptability. The presence of a single replicon suggests a potentially efficient replication mechanism, which could enhance its survival and proliferation in dynamic environments. This efficiency may also allow the strain to respond to environmental stressors, thereby maintaining its ecological niche. In summary, Vibrio sp. F13 strain 10N.222.55.B10 exemplifies the versatility of Vibrio species, with its single replicon suggesting adaptations that can impact its biological and ecological roles in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.55.B10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.55.B10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.55.B10 10N.222.55.B10_contig_1082,

Gene Summary

Adenine Count

1540507 bp

Thymine Count

1544530 bp

Guanine Count

1234800 bp

Cytosine Count

1233543 bp

Genome Length

5604507 bp

Protein-coding Genes

5271 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dicarboxylate/amino acid:cation symporterFCV67_12760Not AvailableNegative2811439 - 281269843920.1
tryptophan synthase subunit alphaFCV67_12765Not AvailableNegative2813070 - 281387628374.1
tryptophan synthase subunit betaFCV67_12770Not AvailableNegative2813876 - 281506642912.3
bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpfFCV67_12775Not AvailableNegative2815226 - 281667752790.5
anthranilate phosphoribosyltransferaseFCV67_12780Not AvailableNegative2816703 - 281769835321.4
aminodeoxychorismate/anthranilate synthase component iiFCV67_12785Not AvailableNegative2817708 - 281831621770.3
anthranilate synthase component 1FCV67_12790Not AvailableNegative2818319 - 281990858830.4
trp operon leader peptideFCV67_12795Not AvailableNegative2820095 - 28202205048.77
php domain-containing proteinFCV67_12800Not AvailablePositive2820341 - 282119531768.8
threonylcarbamoyl-amp synthaseFCV67_12805Not AvailablePositive2821258 - 282187822916.5

Displaying genes 2511 – 2520 of 5363 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.