Vibrio sp. F13 strain 10N.222.55.B10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. F13 strain 10N.222.55.B10 is characterized by having a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number SYVC00000000.1, which provides a reference for genomic data and further studies. Vibrio species are known for their ecological roles, particularly in aquatic environments where they can contribute to nutrient cycling and serve as indicators of environmental health. Given its classification as a Vibrio, strain 10N.222.55.B10 may play a significant role in marine ecosystems, potentially influencing microbial communities and interactions within those habitats. Understanding the genomic organization and traits of Vibrio sp. F13 strain 10N.222.55.B10 can shed light on its ecological functions and adaptability. The presence of a single replicon suggests a potentially efficient replication mechanism, which could enhance its survival and proliferation in dynamic environments. This efficiency may also allow the strain to respond to environmental stressors, thereby maintaining its ecological niche. In summary, Vibrio sp. F13 strain 10N.222.55.B10 exemplifies the versatility of Vibrio species, with its single replicon suggesting adaptations that can impact its biological and ecological roles in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. F13
Strainstrain 10N.222.55.B10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. F13 strain 10N.222.55.B10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. F13 strain 10N.222.55.B10 10N.222.55.B10_contig_1082,

Gene Summary

Adenine Count

1540507 bp

Thymine Count

1544530 bp

Guanine Count

1234800 bp

Cytosine Count

1233543 bp

Genome Length

5604507 bp

Protein-coding Genes

5271 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2607 family proteinFCV67_11030Not AvailableNegative2439083 - 243937310842.1
ytfj family proteinFCV67_11035Not AvailableNegative2439465 - 244001619488.9
duf1107 family proteinFCV67_11040Not AvailablePositive2440270 - 24404707544.37
peptide-methionine (s)-s-oxide reductase msraFCV67_11045Not AvailableNegative2440581 - 244121023385.3
outer membrane protein assembly factorFCV67_11050Not AvailablePositive2441406 - 244311863617.6
translocation/assembly module tambFCV67_11055Not AvailablePositive2443115 - 2446873135747.0
gamma-glutamylcyclotransferaseFCV67_11060Not AvailablePositive2446892 - 244724813619.2
class 1 fructose-bisphosphataseFCV67_11065Not AvailableNegative2447336 - 244834637213.2
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseFCV67_11070Not AvailablePositive2448617 - 244997549596.9
ubix family flavin prenyltransferaseFCV67_11075Not AvailablePositive2450014 - 245063722359.3

Displaying genes 2171 – 2180 of 5363 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.