Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lygf | FCU55_00005 | Not Available | Negative | 206 - 631 | 16518.0 |
| Trna-thr; | Not Available | Not Available | Positive | 327 - 402 | Not Available |
| Attl | Not Available | Not Available | Positive | 434 - 445 | Not Available |
| Trna-gly; | Not Available | Not Available | Positive | 409 - 483 | Not Available |
| Hypothetical protein | FCU55_00010 | Not Available | Negative | 647 - 1417 | 28115.6 |
| Trna-tyr; | Not Available | Not Available | Positive | 600 - 684 | Not Available |
| Trna-met; | Not Available | Not Available | Positive | 736 - 811 | Not Available |
| Trna-thr; | Not Available | Not Available | Positive | 693 - 768 | Not Available |
| Trna-arg; | Not Available | Not Available | Positive | 912 - 988 | Not Available |
| Dna replication protein | FCU55_00015 | Not Available | Negative | 1439 - 2185 | 27992.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Catheter-associated urinary tract infection | Causes | PMC2900259 |
| Cauti | Causes | PMC2900259 |
| Hemorrhagic colitis | Causes | PMC9731836 |
| Hemolytic and uremic syndrome (hus) | Causes | PMC9731836 |
| Infection in the urinary tract | Causes | PMC10160630 |
| Infection in other extraintestinal sites | Causes | PMC10160630 |
| Haemolytic uraemic syndrome | Causes | PMC11542628 |
| Hus | Causes | PMC11542628 |
| Sepsis | Causes | PMC12660362 |
| Bacteraemia | Causes | PMC12660362 |





