Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | FCU55_02890 | Not Available | Negative | 571485 - 573875 | 86813.2 |
| hypoxanthine phosphoribosyltransferase | FCU55_02895 | Not Available | Positive | 574081 - 574617 | 20116.4 |
| carbonate dehydratase | FCU55_02900 | Not Available | Negative | 574658 - 575320 | 25098.2 |
| abc transporter atp-binding protein | FCU55_02905 | Not Available | Positive | 575429 - 576355 | 34679.2 |
| abc transporter permease | FCU55_02910 | Not Available | Positive | 576352 - 577122 | 28517.9 |
| pts sugar transporter subunit iia | FCU55_02915 | Not Available | Positive | 577227 - 577667 | 16513.0 |
| polysaccharide deacetylase family protein | FCU55_02920 | Not Available | Positive | 577731 - 578960 | 46336.0 |
| aspartate 1-decarboxylase | FCU55_02925 | Not Available | Negative | 578964 - 579344 | 13834.5 |
| rpn family recombination-promoting nuclease/putative transposase | FCU55_02930 | Not Available | Positive | 579618 - 580538 | 35601.9 |
| transposase | FCU55_02935 | Not Available | Positive | 580607 - 580804 | 7626.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





