Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | FCU55_02840 | Not Available | Positive | 556030 - 558693 | 99674.1 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | FCU55_02845 | Not Available | Positive | 558708 - 560600 | 66089.7 |
| dihydrolipoyl dehydrogenase | FCU55_02850 | Not Available | Positive | 560808 - 562232 | 50691.4 |
| duf3300 domain-containing protein | FCU55_02855 | Not Available | Negative | 562303 - 564066 | 65767.1 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | FCU55_02860 | Not Available | Positive | 564421 - 567018 | 93490.4 |
| upf0231 family protein | FCU55_02865 | Not Available | Positive | 567193 - 567555 | 13942.3 |
| adenosylmethionine decarboxylase | FCU55_02870 | Not Available | Negative | 567593 - 568387 | 30416.3 |
| polyamine aminopropyltransferase | FCU55_02875 | Not Available | Negative | 568403 - 569269 | 32309.1 |
| hypothetical protein | FCU55_02880 | Not Available | Negative | 569375 - 569722 | 12854.4 |
| multicopper oxidase cueo | FCU55_02885 | Not Available | Positive | 569888 - 571438 | 56659.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





