Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional riboflavin kinase/fad synthetase | FCU55_02335 | Not Available | Positive | 446268 - 447209 | 34736.4 |
| isoleucine--trna ligase | FCU55_02340 | Not Available | Positive | 447252 - 450068 | 104374.0 |
| lipoprotein signal peptidase | FCU55_02345 | Not Available | Positive | 450068 - 450562 | 18127.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | FCU55_02350 | Not Available | Positive | 450670 - 451119 | 16081.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | FCU55_02355 | Not Available | Positive | 451121 - 452071 | 34776.6 |
| ribonucleoside hydrolase rihc | FCU55_02360 | Not Available | Positive | 452137 - 453051 | 32611.7 |
| duf805 domain-containing protein | FCU55_02365 | Not Available | Positive | 453074 - 453439 | 13645.9 |
| 4-hydroxy-tetrahydrodipicolinate reductase | FCU55_02370 | Not Available | Positive | 453600 - 454421 | 28772.4 |
| carbamoyl-phosphate synthase small subunit | FCU55_02375 | Not Available | Positive | 454877 - 456025 | 41417.4 |
| carbamoyl-phosphate synthase large subunit | FCU55_02380 | Not Available | Positive | 456043 - 459264 | 117907.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





