Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | FCU55_02085 | Not Available | Positive | 391835 - 392617 | 28962.8 |
| yjjw family glycine radical enzyme activase | FCU55_02090 | Not Available | Negative | 393032 - 393895 | 31462.3 |
| yjji family glycine radical enzyme | FCU55_02095 | Not Available | Negative | 393867 - 395417 | 58033.3 |
| deoxyribose-phosphate aldolase | FCU55_02100 | Not Available | Positive | 395675 - 396454 | 27749.3 |
| thymidine phosphorylase | FCU55_02105 | Not Available | Positive | 396532 - 397854 | 47155.9 |
| phosphopentomutase | FCU55_02110 | Not Available | Positive | 397906 - 399129 | 44395.4 |
| purine-nucleoside phosphorylase | FCU55_02115 | Not Available | Positive | 399186 - 399905 | 25937.4 |
| type ii toxin-antitoxin system hipa family toxin yjjj | FCU55_02120 | Not Available | Positive | 400072 - 401403 | 49732.4 |
| lipoate--protein ligase lpla | FCU55_02125 | Not Available | Negative | 401404 - 402420 | 37931.9 |
| ytjb family periplasmic protein | FCU55_02130 | Not Available | Negative | 402448 - 403092 | 24070.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





