Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_01770 | Not Available | Negative | 344839 - 345732 | 34502.6 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | FCU55_01775 | Not Available | Negative | 345886 - 346632 | 27660.1 |
| protein ycar | FCU55_01780 | Not Available | Negative | 346629 - 346811 | 6825.33 |
| winged helix-turn-helix domain-containing protein | FCU55_01785 | Not Available | Negative | 346863 - 348095 | 47576.5 |
| tetraacyldisaccharide 4'-kinase | FCU55_01790 | Not Available | Negative | 348132 - 349118 | 35545.4 |
| lipid a export atp-binding/permease msba | FCU55_01795 | Not Available | Negative | 349115 - 350863 | 64510.8 |
| comec family protein | FCU55_01800 | Not Available | Negative | 350900 - 353164 | 84564.2 |
| integration host factor subunit beta | FCU55_01805 | Not Available | Negative | 353370 - 353654 | 10651.8 |
| 30s ribosomal protein s1 | FCU55_01810 | Not Available | Negative | 353814 - 355487 | 61161.5 |
| (d)cmp kinase | FCU55_01815 | Not Available | Negative | 355598 - 356281 | 24747.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





