Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Abc transporter | FCU55_14295 | Not Available | Positive | 2974910 - 2975662 | 27705.8 |
| Helix-turn-helix transcriptional regulator | FCU55_14300 | Not Available | Positive | 2975892 - 2976614 | 28036.8 |
| duf2594 family protein | FCU55_14305 | Not Available | Negative | 2976682 - 2976906 | 8239.04 |
| hypothetical protein | FCU55_14310 | Not Available | Negative | 2976893 - 2977069 | 6795.52 |
| two-component system response regulator uvry | FCU55_14315 | Not Available | Positive | 2977365 - 2978021 | 23864.1 |
| Hypothetical protein | FCU55_14320 | Not Available | Positive | 2978018 - 2979850 | 68192.0 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | FCU55_14325 | Not Available | Positive | 2979907 - 2980455 | 20701.7 |
| Trna,type:gly,anti_codon:gcc; | Not Available | Not Available | Positive | 2980607 - 2980682 | Not Available |
| Trna,type:cys,anti_codon:gca; | Not Available | Not Available | Positive | 2980736 - 2980809 | Not Available |
| Trna,type:leu,anti_codon:taa; | Not Available | Not Available | Positive | 2980822 - 2980908 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





