Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | FCU55_01320 | Not Available | Positive | 248997 - 249410 | 16134.8 |
| phosphate starvation-inducible protein phoh | FCU55_01325 | Not Available | Negative | 249460 - 250524 | 39406.2 |
| deferrochelatase/peroxidase efeb | FCU55_01330 | Not Available | Negative | 250875 - 252146 | 46637.7 |
| iron uptake system protein efeo | FCU55_01335 | Not Available | Negative | 252152 - 253279 | 41166.9 |
| ftr1 family protein | FCU55_01340 | Not Available | Negative | 253337 - 254167 | 30387.8 |
| sodium/proline symporter putp | FCU55_01345 | Not Available | Negative | 254387 - 255895 | 54236.2 |
| hypothetical protein | FCU55_01350 | Not Available | Negative | 256054 - 256263 | 7765.84 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | FCU55_01355 | Not Available | Positive | 256318 - 260280 | 143839.0 |
| hth-type transcriptional regulator rutr | FCU55_01360 | Not Available | Negative | 260320 - 260958 | 23688.9 |
| pyrimidine utilization protein a | FCU55_01365 | Not Available | Positive | 261246 - 262337 | 39959.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





