Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curli production assembly/transport protein csgg | FCU55_01270 | Not Available | Positive | 237049 - 237882 | 30589.0 |
| duf1097 domain-containing protein | FCU55_01275 | Not Available | Negative | 237947 - 238438 | 17090.4 |
| molecular chaperone | FCU55_01280 | Not Available | Negative | 238540 - 239094 | 20725.4 |
| phosphatase | FCU55_01285 | Not Available | Negative | 239118 - 239855 | 26860.0 |
| glyoxylate/hydroxypyruvate reductase ghra | FCU55_01290 | Not Available | Negative | 239910 - 240848 | 35340.4 |
| Trna-ser | Not Available | Not Available | Positive | 241082 - 241169 | Not Available |
| ggdef domain-containing protein | FCU55_01300 | Not Available | Negative | 241274 - 242641 | 52020.9 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | FCU55_01305 | Not Available | Positive | 243227 - 245650 | 92516.3 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | FCU55_01310 | Not Available | Positive | 245659 - 247677 | 77322.8 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | FCU55_01315 | Not Available | Positive | 247670 - 248995 | 50697.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





