Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | FCU55_01120 | Not Available | Negative | 211002 - 211925 | 33773.4 |
| duf480 domain-containing protein | FCU55_01125 | Not Available | Negative | 211927 - 212574 | 24119.7 |
| 30s ribosomal protein s5 alanine n-acetyltransferase | FCU55_01130 | Not Available | Negative | 212585 - 213169 | 22675.1 |
| multidrug efflux mfs transporter mdth | FCU55_01135 | Not Available | Positive | 213405 - 214613 | 44366.0 |
| glutaredoxin 2 | FCU55_01140 | Not Available | Positive | 214677 - 215324 | 24351.6 |
| lipoprotein | FCU55_01145 | Not Available | Positive | 215457 - 216017 | 20501.0 |
| dihydroorotase | FCU55_01150 | Not Available | Positive | 216123 - 217166 | 38687.4 |
| dna damage-inducible protein i | FCU55_01155 | Not Available | Positive | 217243 - 217488 | 8949.43 |
| biofilm formation regulator bsss | FCU55_01160 | Not Available | Positive | 217777 - 218031 | 9664.31 |
| n-methyl-l-tryptophan oxidase | FCU55_01165 | Not Available | Positive | 218146 - 219264 | 40857.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





