Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta' | FCU55_00970 | Not Available | Negative | 181968 - 182972 | 36963.7 |
| dtmp kinase | FCU55_00975 | Not Available | Negative | 182969 - 183610 | 23761.5 |
| cell division protein yceg | FCU55_00980 | Not Available | Negative | 183600 - 184622 | 38249.5 |
| aminodeoxychorismate lyase | FCU55_00985 | Not Available | Negative | 184625 - 185434 | 29771.9 |
| beta-ketoacyl-acp synthase ii | FCU55_00990 | Not Available | Negative | 185554 - 186795 | 43048.3 |
| acyl carrier protein | FCU55_00995 | Not Available | Negative | 186883 - 187119 | 8639.99 |
| 3-oxoacyl-acp reductase fabg | FCU55_01000 | Not Available | Negative | 187330 - 188064 | 25561.9 |
| malonyl coa-acp transacylase | FCU55_01005 | Not Available | Negative | 188077 - 189006 | 32419.0 |
| ketoacyl-acp synthase iii | FCU55_01010 | Not Available | Negative | 189022 - 189975 | 33547.1 |
| phosphate acyltransferase plsx | FCU55_01015 | Not Available | Negative | 190043 - 191113 | 38226.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





