Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | FCU55_00825 | Not Available | Positive | 150480 - 151601 | 42567.2 |
| peptidase t | FCU55_00830 | Not Available | Negative | 151650 - 152876 | 44912.0 |
| spermidine/putrescine abc transporter atp-binding protein pota | FCU55_00835 | Not Available | Positive | 153126 - 154262 | 43030.8 |
| spermidine/putrescine abc transporter permease potb | FCU55_00840 | Not Available | Positive | 154246 - 155103 | 32224.3 |
| spermidine/putrescine abc transporter permease potc | FCU55_00845 | Not Available | Positive | 155100 - 155894 | 29112.7 |
| spermidine/putrescine abc transporter substrate-binding protein potd | FCU55_00850 | Not Available | Positive | 155891 - 156937 | 38855.0 |
| duf3592 domain-containing protein | FCU55_00855 | Not Available | Positive | 156995 - 157456 | 17464.0 |
| tpm domain-containing protein | FCU55_00860 | Not Available | Positive | 157453 - 158241 | 28812.4 |
| nad-dependent protein deacylase | FCU55_00865 | Not Available | Negative | 158379 - 159200 | 30968.2 |
| n-acetylglucosamine kinase | FCU55_00870 | Not Available | Negative | 159216 - 160127 | 33058.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





