Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_00780 | Not Available | Positive | 142138 - 142263 | 4893.17 |
| nadp-dependent isocitrate dehydrogenase | FCU55_00785 | Not Available | Negative | 142347 - 143597 | 45772.4 |
| 23s rrna pseudouridine(2457) synthase rlue | FCU55_00790 | Not Available | Positive | 143769 - 144422 | 24839.7 |
| phosphatase nudj | FCU55_00795 | Not Available | Positive | 144432 - 144893 | 17433.8 |
| trna 2-thiouridine(34) synthase mnma | FCU55_00800 | Not Available | Positive | 144947 - 146053 | 40961.7 |
| high frequency lysogenization protein hfld | FCU55_00805 | Not Available | Positive | 146089 - 146730 | 22935.0 |
| adenylosuccinate lyase | FCU55_00810 | Not Available | Positive | 146734 - 148104 | 51526.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 147790 - 148166 | Not Available |
| two-component system response regulator phop | FCU55_00815 | Not Available | Positive | 148273 - 148944 | 25536.7 |
| two-component system sensor histidine kinase phoq | FCU55_00820 | Not Available | Positive | 148944 - 150404 | 55302.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





