Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine zipper family protein | FCU55_00715 | Not Available | Positive | 133605 - 133949 | 10807.6 |
| ymgd family protein | FCU55_00720 | Not Available | Positive | 133959 - 134288 | 11852.5 |
| hypothetical protein | FCU55_00735 | Not Available | Negative | 136251 - 136469 | 8237.33 |
| hypothetical protein | FCU55_00745 | Not Available | Negative | 137792 - 138040 | 9638.77 |
| regulatory protein arir | FCU55_00750 | Not Available | Negative | 138153 - 138419 | 9696.56 |
| two-component-system connector protein ymga | FCU55_00755 | Not Available | Negative | 138448 - 138720 | 10345.5 |
| two-component-system connector protein ycgz | FCU55_00760 | Not Available | Negative | 138763 - 138999 | 8694.37 |
| blue light-responsive regulator bluf | FCU55_00765 | Not Available | Positive | 139313 - 140524 | 45304.6 |
| merr family transcriptional regulator | FCU55_00770 | Not Available | Positive | 140729 - 141460 | 28304.3 |
| duf1398 domain-containing protein | FCU55_00775 | Not Available | Positive | 141681 - 142085 | 15823.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





