Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter substrate-binding protein | FCU55_00555 | Not Available | Positive | 106170 - 107192 | 37715.4 |
| iron abc transporter permease | FCU55_00560 | Not Available | Positive | 107192 - 108172 | 34825.0 |
| abc transporter atp-binding protein | FCU55_00565 | Not Available | Positive | 108169 - 108927 | 27502.9 |
| methyltransferase domain-containing protein | FCU55_00570 | Not Available | Positive | 108937 - 109749 | 30965.4 |
| modd protein | FCU55_00575 | Not Available | Positive | 109746 - 110600 | 30554.9 |
| tonb-dependent receptor | FCU55_00580 | Not Available | Positive | 110626 - 112596 | 73463.0 |
| glsb/yeaq/ymge family stress response membrane protein | FCU55_00585 | Not Available | Negative | 112646 - 112900 | 8703.27 |
| flagellar brake protein | FCU55_00590 | Not Available | Positive | 113101 - 113835 | 27843.8 |
| membrane-bound lytic murein transglycosylase emta | FCU55_00595 | Not Available | Negative | 113837 - 114448 | 22213.7 |
| muramoyltetrapeptide carboxypeptidase | FCU55_00600 | Not Available | Positive | 114548 - 115462 | 33534.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





