Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3-like element is150 family transposase | FCU55_26865 | Not Available | Negative | 5292466 - 5293835 | 53107.1 |
| is3-like element is1397 family transposase | FCU55_26870 | Not Available | Positive | 5293935 - 5295283 | 51896.5 |
| transposase | FCU55_26875 | Not Available | Positive | 5295316 - 5295419 | 3775.67 |
| is66-like element isec23 family transposase | FCU55_26880 | Not Available | Positive | 5295450 - 5296555 | 42304.6 |
| hypothetical protein | FCU55_26885 | Not Available | Positive | 5296556 - 5296615 | 2293.74 |
| glutamate decarboxylase | FCU55_26900 | Not Available | Positive | 5297423 - 5297790 | 14039.5 |
| host specificity protein j | FCU55_26905 | Not Available | Negative | 5297791 - 5298864 | 39171.0 |
| tonb-dependent siderophore receptor | FCU55_26915 | Not Available | Negative | 5299918 - 5300951 | 38245.4 |
| lytic transglycosylase | FCU55_26920 | Not Available | Negative | 5300952 - 5301062 | 4382.71 |
| relaxosome protein tram | FCU55_26925 | Not Available | Positive | 5301383 - 5301766 | 14518.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





