Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna reductase | FCU55_00340 | Not Available | Negative | 63822 - 65078 | 46333.5 |
| lipoprotein localization protein lolb | FCU55_00345 | Not Available | Positive | 65292 - 65915 | 23590.1 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | FCU55_00350 | Not Available | Positive | 65915 - 66766 | 30957.2 |
| ribose-phosphate pyrophosphokinase | FCU55_00355 | Not Available | Positive | 66917 - 67864 | 34220.3 |
| c4-dicarboxylic acid transporter daua | FCU55_00360 | Not Available | Positive | 67989 - 69668 | 59446.9 |
| stress-induced protein ychh | FCU55_00365 | Not Available | Negative | 69723 - 70001 | 10486.9 |
| aminoacyl-trna hydrolase | FCU55_00370 | Not Available | Positive | 70279 - 70863 | 21113.6 |
| redox-regulated atpase ychf | FCU55_00375 | Not Available | Positive | 70980 - 72071 | 39655.5 |
| duf4102 domain-containing protein | FCU55_00380 | Not Available | Positive | 72286 - 73461 | 44795.1 |
| is3 family transposase | FCU55_00385 | Not Available | Positive | 73572 - 73856 | 10902.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





