Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1472 domain-containing protein | FCU55_26340 | Not Available | Negative | 5218893 - 5219465 | 21383.6 |
| duf1380 domain-containing protein | FCU55_26350 | Not Available | Negative | 5220159 - 5220593 | 16031.1 |
| hypothetical protein | FCU55_26355 | Not Available | Negative | 5220606 - 5220827 | 8591.31 |
| dna methylase | FCU55_26360 | Not Available | Negative | 5220828 - 5221511 | 25491.5 |
| duf1281 domain-containing protein | FCU55_26370 | Not Available | Negative | 5221895 - 5222797 | 33801.5 |
| hypothetical protein | FCU55_26375 | Not Available | Negative | 5222835 - 5223104 | 9533.66 |
| protein impc | FCU55_26380 | Not Available | Positive | 5223215 - 5223463 | 9502.3 |
| translesion error-prone dna polymerase v autoproteolytic subunit | FCU55_26385 | Not Available | Positive | 5223460 - 5223897 | 16220.1 |
| translesion error-prone dna polymerase v subunit umuc | FCU55_26390 | Not Available | Positive | 5223897 - 5224722 | 30824.3 |
| duf3560 domain-containing protein | FCU55_26395 | Not Available | Positive | 5224723 - 5225772 | 40199.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





