Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamylcyclotransferase | FCU55_00290 | Not Available | Negative | 56659 - 57354 | 25529.7 |
| putative cation transport regulator chab | FCU55_00295 | Not Available | Negative | 57503 - 57742 | 9292.53 |
| sodium-potassium/proton antiporter chaa | FCU55_00300 | Not Available | Positive | 58012 - 59112 | 39166.9 |
| small toxic polypeptide ldra/ldrc | FCU55_00310 | Not Available | Positive | 59517 - 59624 | 4041.11 |
| 3-deoxy-8-phosphooctulonate synthase | FCU55_00315 | Not Available | Negative | 59773 - 60627 | 30834.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 61330 - 61513 | Not Available |
| tetratricopeptide repeat-containing protein | FCU55_00320 | Not Available | Negative | 60663 - 61472 | 30843.1 |
| sirb family protein | FCU55_00325 | Not Available | Negative | 61476 - 61868 | 14654.7 |
| peptide chain release factor n(5)-glutamine methyltransferase | FCU55_00330 | Not Available | Negative | 61865 - 62698 | 30932.8 |
| peptide chain release factor 1 | FCU55_00335 | Not Available | Negative | 62698 - 63780 | 40519.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





